Department of Biological Sciences
Indian Institute of Science Education and Research Bhopal

SNo Authors Title of Article Journal Year
1 Ram Kumar Mishra Vimlesh Kumar Saurabh Jayesh Kumar Mehta Drosophila ELYS Regulates Dorsal Dynamics during Development Journal of Biological Chemistry 2020
2 Aman Singh Vipin Bhardwaj Pavitra Ramdas Ajit Chande Nagarjun Vijay Coevolution of retroviruses with SERINCs following whole-genome duplication divergence bioRxiv 2020
3 Arpita Yadav Deeksha Singh Maneesh Lingwan Premachandran Yadukrishnan Shyam Kumar Masakapalli Sourav Datta Light signaling and UV-B mediated plant growth regulation Journal of Integrative Plant Biology 2020
4 Pavitra Ramdas Vipin Bhardwaj Aman Singh Nagarjun Vijay Ajit Chande Coevolution of retroviruses with SERINCs following whole-genome duplication divergence bioRxiv 2020
5 Ajinkya Bharatraj Patil Sagar Sharad Shinde Raghavendra S Satish B N Kushalappa C G Nagarjun Vijay CoalQC - Quality control while inferring demographic histories from genomic data: Application to forest tree genomes bioRxiv 2020
6 Irene Saha Hemant Jaiswal Richa Mishra Hendrick J Nel Jaring Scheuder Monika Kaushik Kuldeep Singh Chauhan Bhupendra Singh Rawat Renjeny THomas Shalin Naik Himanshu Kumar Prafullakumar Tailor RelB suppresses type I Interferon signaling in dendritic cells Cellular Immunology 2020
7 Himanshu Kumar Balancing immune tolerance and immune responses International Reviews of Immunology 2020
8 Himanshu kumar Therapeutic approaches for genetic and infectious diseases International Reviews of Immunology 2020
9 Deepak Pant Sathiya P Narayanan Nagarjun Vijay Sanjeev Shukla Hypoxia-induced changes in intragenic DNA methylation correlate with alternative splicing in breast cancer Journal of Biosciences 2020
10 S R Adusumalli D G Rawale K Thakur L Purushottam N C Reddy N Kalra S Shukla V Rai Chemoselective and Site‐Selective Lysine‐Directed Lysine Modification Enables Single‐Site Labeling of Native Proteins Angewandte Chemie International Edition 2020
11 Vineet K Sharma Gopal Srivastava Aditya Malve Molib: A machine learning based classification tool for the prediction of biofilm inhibitory molecules Genomics 2020
12 Rituja Saxena Parul Mittal Atul Gupta Shruti Mahajan Vineet K Sharma The gene catalogue and comparative analysis of gut microbiome of big cats provide new insights on Panthera species Frontiers in Microbiology 2020
13 et al Megha Jain Aashutosh Tripathi sunando Datta EhC2B, a C2 domain-containing protein, promotes erythrophagocytosis in Entamoeba histolytica via actin nucleation PLOS Pathogen 2020
14 Vikas Jain Gokul Nair Separation of Mycobacterium smegmatis from a mixed culture using the cell wall binding domain of D29 mycobacteriophage endolysin Frontiers in Microbiology 2020
15 Varun Rakeshbhai Bavda Vikas Jain Deciphering the Role of Holin in Mycobacteriophage D29 Physiology Frontiers in Microbiology 2020
16 Surya Pratap Seniya Vikas Jain Construction of E. coli—Mycobacterium shuttle vectors with a variety of expression systems and polypeptide tags for gene expression in mycobacteria PLoS One 2020
17 Yadukrishnan Premachandran Rahul Puthan Valappil Nevedha Ravindran Katharina Bursch Henrik Johansson Sourav Datta CONSTITUTIVELY PHOTOMORPHOGENIC1 promotes ABA-mediated inhibition of post germination seedling establishment Plant Journal 2020
18 Shubham K. Jaiswal Abhisek Chakraborty Shruti Mahajan Sudhir Kumar Vineet K. Sharma The genome sequence of Aloe vera reveals adaptive evolution of drought tolerance mechanisms bioRxiv 2020
19 Anagha Basargekar Shweta Yoni Zeeshan Mushtaq Senthilkumar Deivasigamani Vimlesh Kumar Girish S Ratnaparkhi Anuradha Ratnaparkhi Drosophila Mon1 and Rab7 interact to regulate glutamate receptor levels at the neuromuscular junction Int. J. Dev. Biol. 2020
20 Rakesh Sahu Sakshi Singh Raghuvir Tomar The mechanisms of action of chromatin remodelers and implications in development and diseases Biochemical Pharmacology 2020
21 Premachandran Yadukrishnan Puthan Valappil Rahul Sourav Datta HY5 suppresses, rather than promotes, ABA-mediated inhibition of post-germination seedling development Plant Physiology 2020
22 Ajit Chande Arkaprabha Giri Vipin Bhardwaj MD. Waseem Hussain Abhijit Patra Functional Ionic Porous Frameworks Based on Triaminoguanidinium for CO2 Conversion and Combating Microbes Chemical Science 2020
23 Santhosh Sariki Pushpendra Sahu Laxmidhar Das Nitu Saha Rakesh Sahu Raghuvir Tomar SWI/SNF chromatin remodeling complex contributes to clearance of cytoplasmic protein aggregates and regulates unfolded protein response in Saccharomyces cerevisiae FEBS Journal 2020
24 Priyanka Sharma et al SNX27-retromer Assembly Recycles MT1-MMP to Invadopodia and Promotes Breast Cancer Metastasis J Cell Biology 2020
25 Saurabh Jayesh Kumar Mehta Vimlesh Kumar Ram Kumar Mishra Drosophila ELYS Regulates Dorsal Dynamics during Development Journal of Biological Chemistry 2020
26 Pilendra Kumar Thakre Upendarrao Golla Identification of histone H3 and H4 amino acid residues important for the regulation of arsenite stress signaling in Saccharomyces cerevisiae Chemical Research in Toxicology 2020
27 Tuhin Kumar Maji Vaibhav Kumar Samir Kumar Pal Kausik Majumdar K. V. Adarsh Debjani Karmakar Intricate modulation of interlayer coupling at GO/MoSe2 interface: application in time-dependent optics and device transport Physical Review B 2019
28 P. Pradhan Pritam Khan J. R. Aswin K. V. Adarsh R. Naik N. Das A. K. Panda Quantification of nonlinear absorption in ternary As-Sb-Se chalcogenide glasses Journal of Applied Physics 2019
29 Vineet Kumar Sharma Ankit Gupta Darshan Dhakan Abhijit Maji Rituja Saxena Joby Pulikkan Vishnu Prasoodanan Jacob Kurian Andres Gomez Joy Scaria Kathrine Amato Ashok Sharma Association of Flavonifractor plautii, a Flavonoid-Degrading Bacterium, with the Gut Microbiome of Colorectal Cancer Patients in India mSystems 2019
30 Parul Mittal Vishnu Prasoodanan PK Darshan B Dhakkan Sanjiv Kumar Vineet K Sharma Metagenome of a polluted river reveals a reservoir of metabolic and antibiotic resistance genes Environmental Microbiome 2019
31 Ankit Gupta Ahmad Ahmad Dipesh Chowthe Midhun K Madhu Shireesh Srivastava Vineet K Sharma Genome-scale metabolic reconstruction and metabolic versatility of an obligate methanotroph Methylococcus capsulatus str. Bath PeerJ 2019
32 Radhakrishnan Mahalakshmi Aromatic Interactions in β-Hairpin Scaffold Stability: A Historical Perspective. Arch. Biochem. Biophys 2019
33 Ankit Gupta Radhakrishnan Mahalakshmi Reversible folding energetics of Yersinia Ail barrel reveals a hyperfluorescent intermediate Biochim. Biophys. Acta (Biomembranes) 2019
34 Vineet Kumar Sharma Parul Mittal Shubham Jaiswal Rituja Saxena Nagarjun Vijay Vineet Sharma Comparative analysis of corrected tiger genome provides clues to its neuronal evolution Scientific Reports 2019
35 N.S. Hari Narayana Moorthy Amit Kumar Verma Chandan Sahi Shraddha V. Bhadada Chandrabose Karthikeyan Neelesh Maheshwari Piyush Trivedi Design, synthesis and biological evaluation of some tetrazole acetamide derivatives as novel non-carboxylic PTP1B inhibitors. Bioorganic Chemistry 2019
36 Santhosh Kumar Sariki Ramesh Kumawat Vikash Singh Raghuvir Singh Tomar Flocculation of Saccharomyces cerevisiae is dependent on activation of Slt2 and Rlm1 regulated by the Cell Wall Integrity pathway Molecular Microbiology 2019
37 Pushpendra Kumar Sahu Sagar Salin Sakshi Chauhan Reverse genetic analysis of yeast YPR099C/MRPL51 reveals a critical role of both overlapping ORFs in respiratory growth and MRPL51 in mitochondrial DNA maintenance FEMS Yeast Research 2019
38 Vineet K Sharma Kundan Kumar Gaurao Dhoke Ashok K Sharma Shubham Jaiswal Mechanistic elucidation of amphetamine metabolism by tyramine oxidase from human gut microbiota using molecular dynamics simulations JOURNAL OF CELLULAR BIOCHEMISTRY 2019
39 M Kapoor J C Wang S P Farris J McClintick I Gupta J L Meyers S Bertelsen M Chao J Nurnberger J Tischfield O Harari L Zeran V Hesselbrock L Bauer T Raj B Porjesz A Agarwal T Foroud H J Edenberg R D Mayfield A Goate Analysis of whole genome-transcriptomic organization in brain to identify genes associated with alcoholism Translational Psychiatry 2019
40 Varun Chaudhary Michael Boutros Exocyst-mediated apical Wg secretion activates signaling in the Drosophila wing epithelium PLOS Genetics 2019
41 Tony Grace Andres Gomez Joy Scaria Rituja Saxena Ashok Sharma Abhijit Maji Darshan Dhakan Joby Pulikkan Vineet K Sharma The unique composition of Indian gut microbiome, gene catalogue and associated faecal metabolome deciphered using multi-omics approaches GigaScience 2019
42 Himanshu Kumar Approaches for deciphering the molecular basis of disease and its translational benefits International Reviews of Immunology 2019
43 Pushpendra Kumar Sahu Raghuvir Singh Tomar The natural anticancer agent cantharidin alters GPI-anchored protein sorting by targeting Cdc1-mediated remodeling in endoplasmic reticulum Journal of Biological Chemistry 2019
44 Himanshu Joshi Gokul Nair Rutuja Gangakhedkar Vikas Jain Understanding the role of lysozyme-like domain of the D29 mycobacteriophage-encoded endolysin in the host cell lysis and phage propagation Microbiology 2019
45 Varsha Patil Vikas Jain Insights into the physiology and metabolism of a mycobacterial cell in an energy-compromised state Journal of Bacteriology 2019
46 Arpita Yadav Souvika Bakshi Premachandran Yadukrishnan Maneesh Lingwan Ulla Dolde Stephan Wenkel Shyam Kumar Masakapalli Sourav Datta The B-box-containing microprotein miP1a/BBX31 regulates photomorphogenesis and UV-B protection Plant Physiology 2019
47 Himanshu Kumar Akhilesh Kumar Long noncoding RNA: TRIMming the viral load Cellular & molecular Immunology 2019
48 Himanshu Kumar Immunity and its role in white plague and obesity International Reviews of Immunology 2019
49 S Kumar PK L Chandan Sahi Rajesh S Powar Sida cordifolia accelerates wound healing process delayed by dexamethasone in rats: Effect on ROS and probable mechanism of action. Journal of Ethnopharmacology. 2019
50 Mansi Gujrati Rohit Mittal Lakhan P Ekal Ram Kumar Mishra SUMOylation of periplakin is critical for efficient reorganization of keratin filament network Molecular Biology of the Cell 2019
51 Himanshu Kumar Amit Awasthi T cell subtypes and its therapeutic potential in autoimmune diseases and cancer International Reviews of Immunology 2019
52 Arpita Yadav Maneesh Lingwan Premachandran Yadukrishnan Shyam Kumar Masakapalli Sourav Datta BBX31 promotes hypocotyl growth, primary root elongation and UV-B tolerance in Arabidopsis Plant Signaling & Behavior 2019
53 Pushpendra Kumar Sahu Sakshi Chauhan Raghuvir Singh Tomar Crg1 N-terminus is essential for methyltransferase activity and Cantharidin resistance in Saccharomyces cerevisiae Biochemistry 2019
54 Adiki Rajasekhar Bhagaban Mallik Vimlesh Kumar Jeyaraman Sankar A Cell-Permeant Small Molecule for Super-Resolution Imaging of Endoplasmic Reticulum in Live Cells Organic & Biomolecular Chemistry 2019
55 Vinita Gowda Ajith Ashokan Hedychium ziroense (Zingiberaceae), a new species of ginger lily from Northeast India. Phytokeys 2019
56 Amit K. Verma Chetana Tamadaddi Yogesh Tak Silviya S. Lal Sierra J. Cole Justin K. Hines Chandan Sahi The expanding world of plant J-domain proteins CRITICAL REVIEWS IN PLANT SCIENCES 2019
57 Purushottam L Adusumalli S R Usha Singh Unnikrishnan V B Gautam D Rawale Mansi Gujrati Ram Kumar Mishra Vishal Rai Single-site glycine-specific labeling of proteins Nature Communications ( Open Access from 2016) 2019
58 Varun Chaudhary Swapnil Hingole Jana Frei Fillip Port David Strutt Michael Boutros Robust Wnt signaling is maintained by a Wg protein gradient and Fz2 receptor activity in the developing Drosophila wing Development 2019
59 Neha Upadhyay Debojyoti Kar Bhagyashri Deepak Mahajan Sanchali Nanda Rini Rahiman Nimisha Abhay Panchakshari Lavanya Bhagavatula Sourav Datta The multitasking abilities of MATE transporters in plants Journal of Experimental Botany 2019
60 Ankit Gupta Radhakrishnan Mahalakshmi Helix–strand interaction regulates stability and aggregation of the human mitochondrial membrane protein channel VDAC3 J. Gen. Physiol. 2019
61 Bharat Iyer Radhakrishnan Mahalakshmi Hydrophobic characteristic is energetically preferred for cysteine in a model membrane protein Biophysical Journal 2019
62 Abhishek Anil Dubey Vikas Jain MnoSR is a bona fide two-component system involved in methylotrophic metabolism in Mycobacterium smegmatis Applied and Environmental Microbiology 2019
63 Himanshu Kumar MIhai Oltean Donor-specific antibodies and organ transplantation: a dangerous mix International Reviews of Immunology 2019
64 Himanshu Kumar Host defense: basic, disease and translational biology International Reviews of Immunology 2019
65 Sourav Datta Debojyoti Kar Neha Upadhyay A Multidrug and Toxic compound Extrusion (MATE) transporter modulates auxin levels in root to regulate root development and promotes aluminium tolerance Plant, Cell & Environment 2019
66 Abhishek A Dubey Vikas Jain Mycofactocin is essential for the establishment of methylotrophy in Mycobacterium smegmatis Biochemical and Biophysical Research Communications 2019
67 Suprakash Biswas Neha Upadhyay Debojyoti Kar Sourav Datta Apurba Lal Koner Visible light-controlled NO generation for photoreceptor-mediated plant root growth regulation Nitric Oxide 2019
68 Radhakrishnan Mahalakshmi Human Mitochondrial VDAC Functionality Governs Scaffold Stability. Biophysical Journal 2018
69 Vineet Kumar Sharma Kundan Kumar Shubham Jaiswal Gaurao Dhoke Ashok Sharma Mechanistic and structural insight into promiscuity based metabolism of cardiac drug digoxin by gut microbial enzyme JOURNAL OF CELLULAR BIOCHEMISTRY 2018
70 Prashant Waiker Yogesh Tak Amit K Verma Kirpa Yadav Sandeep S Raut Chandan Sahi Co-evolution of spliceosomal disassembly interologs: crowning J-protein component with moonlighting RNA-binding activity. Current Genetics 2018
71 Shashank Ranjan Srivastava Punit Zadafiya Radhakrishnan Mahalakshmi Hydrophobic mismatch modulates stability and plasticity of human mitochondrial VDAC2. Biophysical Journal 2018
72 Chandan Sahi et al Harm Kampinga Function, evolution, and structure of J-domain proteins Cell Stress and Chaperones 2018
73 Runa Hamid Nikhil Hajirnis Shikha Kushwaha Sadaf Saleem Vimlesh Kumar Rakesh K Mishra Drosophila Choline transporter non-canonically regulates pupal eclosion and NMJ integrity through a neuronal subset of mushroom body Developmental Biology 2018
74 M Chilamari N Kalra S Shukla Rai Vishal Single-site labeling of lysine in proteins through a metal-free multicomponent approach Chemical Communications 2018
75 Sourav Datta Katharina Bursch Premachandran Yadukrishnan Nikhil Job Henrik Johansson Two B-box proteins regulate photomorphogenesis by oppositely modulating HY5 through their diverse C-terminal domains Plant Physiology 2018
76 S R Adusumalli D G Rawale U Singh P Tripathi R Paul N Kalra R K Mishra S Shukla V Rai Single-Site Labeling of Native Proteins Enabled by a Chemoselective and Site-Selective Chemical Technology J.Am.Chem.Soc 2018
77 Pilendra Thakre Athira SV Upendarrao Golla Sakshi Chauhan Raghuvir Tomar Previously uncharacterized amino acid residues in histone H3 and H4 mutants with roles in DNA damage repair response and cellular aging FEBS Journal 2018
78 Ashish Kumar Akhilesh Kumar Harshad Ingle Sushil Kumar Richa Mishra Mahendra Kumar Verma Debasis Biswas Nachimuthu Senthil Kumar Anamika Mishra Ashwin Askok Raut Akinori Takaoka Himanshu Kumar MicroRNA hsa-miR-324-5p Suppresses H5N1 Virus Replication by Targeting the Viral PB1 and Host CUEDC2 Journal of Virology 2018
79 Debajyoti Sinha Akhilesh Kumar Himanshu Kumar Sanghamitra Bandyopadhyay Debarka Sengupta dropClust: efficient clustering of ultra-large scRNA-seq data Nucleic Acids Research 2018
80 Himanshu Kumar Evolution of innate immune sensors and responses during immune disorders and immunization against microbial infection International Reviews of Immunology 2018
81 Vaishak K P Yadukrishnan Premachandran Souvika Bakshi Amit Kumar Kushwaha Harshil Ramachandran Nikhil Job Dion Babu Sourav Datta The B-box bridge between light and hormones in plants Journal of Photochemistry & Photobiology, B: Biology 2018
82 Pullikan Joby Abhijit Maji Darshan Dhakan Tony Grace Gut Microbial Dysbiosis in Indian Children with Autism Spectrum Disorders Microbial Ecology 2018
83 Ajith Ashokan Vinita Gowda Describing terminologies and discussing records: More discoveries of vivipary in the genus Hedychium J. Koenig (Zingiberaceae) from Northeast India Phytokeys 2018
84 Premachandran Yadukrishnan Nikhil Job Henrik Johansson Sourav Datta Opposite Roles of Group IV BBX Proteins: Exploring Missing Links between Structural and Functional Diversity Plant Signaling & Behavior 2018
85 Chaitanya Kotayada Mintu Chandra Aashutosh Tripathi Anil Raj Narooka Sunando Datta Aakash Verma Atypical Switch-I Arginine plays a catalytic role in GTP hydrolysis by Rab21 from Entamoeba histolytica. Biophysical and Biochemical Research Communication 2018
86 Kuldeep Verma Vijay Srivastava Sunando 2. Rab GTPases take centre stage in understanding Entamoeba histolytica biology Small GTPases 2018
87 Ruchika Mishra Zeeshan Mushtaq Ramprasad Regar Bhagaban Mallik Vimlesh Kumar Jeyaraman Sankar Selective Imaging of Lipids in Adipocytes Using an Imidazolyl Derivative of Perylenebisimide ChemBioChem 2018
88 Rajesh Paul Prabhanshu Tripathi Usha Singh Dattatraya Gautam Rawale Srinivasa Rao Adusumalli Neetu Kalra Ram Kumar Mishra Sanjeev Shukla Vishal Rai Single-Site Labeling of Native Proteins Enabled by a Chemoselective and Site-Selective Chemical Technology J.Am.Chem.Soc 2018
89 Somnath D Bhagat Usha Singh Ram Kumar Mishra Aasheesh Srivastava An Endogenous Reactive Oxygen Species (ROS)-Activated Histone Deacetylase Inhibitor Prodrug for Cancer Chemotherapy ChemMedChem 2018
90 Ajit Chande Subhrashis Banerjee Vipin Bhardwaj Popat Shinde Pradip Bagle Amol Gade Nitin Patil Catalytic Enantioselective 1, 3‐Alkyl Shift in Alkyl Aryl Ethers: Efficient Synthesis of Optically Active 3, 3′‐Diaryloxindoles Angewandte Chemie International Edition 2018
91 Deepti Chaturvedi Radhakrishnan Mahalakshmi Folding determinants of transmembrane β-barrels using engineered OMP chimeras Biochemistry 2018
92 Muralikrishna Lella Radhakrishnan Mahalakshmi Direct Structural Annotation of Membrane Protein Aggregation Loci using Peptide–Based Reverse–Mapping J. Phys. Chem. Lett. 2018
93 Chitra Shanbhag Gregor P. Jose Rahul Nisal Jeet Kalia Rapid and reversible hydrazone bioconjugation in cells without the use of extraneous catalysts. Organic & Biomolecular Chemistry 2018
94 Lan Jiang Qingqing Wang Jue Yu Vinita Gowda Gabriel Johnson Jianke Yang Xianzhao Kan Xiaojun Yang miRNAome expression profiles in the gonads of adult Melopsittacus undulatus. PeerJ 2018
95 Nagarjun Vijay Ajit Chande A hypothetical new role for single-stranded DNA binding proteins in the immune system Immunobiology 2018
96 Chandan Sahi Shraddha V. Bhadada Chandrabose Chandrabose Karthikeyan Neelesh Maheshwari Amit K. Verma N.S. Hari N. Moorthy Piyush Trivedi Synthesis and biological evaluation of some N-(3-(1H-tetrazol-5-yl) phenyl)acetamide derivatives as novel non-carboxylic PTP1B inhibitors designed through bioisosteric modulation Bioorganic Chemistry 2018
97 Gajendra Kumar Azad Modifying Chromatin by Histone Tail Clipping Journal of Molecular Biology 2018
98 Sanjeev Shukla Atul Samaiya Rajendra Kumar Panday Smriti Singh Athira Ajith Amit Gupta PAK2–c-Myc–PKM2 axis plays an essential role in head and neck oncogenesis via regulating Warburg effect Cell Death and Disease 2018
99 Debayan Sarkar Yashaswi Singh Jeet Kalia Protein–lipid interfaces can drive the functions of membrane-embedded protein–protein complexes ACS Chemical Biology 2018
100 Abhishek Anil Dubey Saloni Rajesh Wani Vikas Jain Methylotrophy in mycobacteria: Dissection of the methanol metabolism pathway in Mycobacterium smegmatis Journal of Bacteriology 2018
101 Piyoosh Kumar Babele Pilendra Kumar Thakre Ramesh Kumawat Raghuvir Singh Tomar Zinc oxide nanoparticles induce toxicity by affecting cell wall integrity pathway, mitochondrial function and lipid homeostasis in Saccharomyces cerevisiae Chemosphere 2018
102 Vineet K. Sharma Shubham Jaiswal Ankit Gupta Rituja Saxena vishnu Prasoodanan Ashok Sharma Parul Mittal Ankita Roy Aaron Shafer Nagarjun Vijay Vineet K. Sharma Genome Sequence of Peacock Reveals the Peculiar Case of a Glittering Bird Frontiers in Genetics 2018
103 Rituja Saxena Parul Mittal Cecile Clavaud Darshan Dhakan Prashant Hegde Mahesh M. Subarna Saha Luc Souverain Nita Roy Lionel Breton Namita Misra Vineet K. Sharma Comparison of Healthy and Dandruff Scalp Microbiome Reveals the Role of Commensals in Scalp Health Front. Cell. Infect. Microbiol. 2018
104 Ajit Chande Teresa Vanzo Cinzia Bertelli Claudia Firrito Massimo Pizzato SERINC5 as a New Restriction Factor for Human Immunodeficiency Virus and Murine Leukemia Virus Annual Review of Virology 2018
105 Bharat Iyer Pallavi Vetal Henna Noordeen Punit Zadafiya Radhakrishnan Mahalakshmi Salvaging the thermodynamic destabilization of interface histidine in transmembrane β-barrels Biochemistry 2018
106 Radhakrishnan Mahalakshmi Deepti Chaturvedi Position–specific contribution of interface tryptophans on membrane protein energetics Biochim. Biophys. Acta (Biomembranes) 2018
107 Rajesh Kumar Yadav J. Aneesh Rituraj Sharma P. Abhiramnath T. K. Maji Ganesh Ji Omar A. K. Mishra Debjani Karmakar K. V. Adarsh Designing hybrids of graphene oxide- gold nanoparticles for nonlinear optical response Physical Review Applied 2018
108 Radhakrishnan Mahalakshmi Muralikrishna Lella Solvation Driven Conformational Transitions in the Second Transmembrane Domain of Mycobacteriophage Holin. Biopolymers 2017
109 Ankit Gupta Bharat Ramasubramanian Iyer Radhakrishnan Mahalakshmi Approaches for preparation and biophysical characterization of transmembrane β-barrels Springer Protocols Handbooks 2017
110 Ashok K. Sharma Gopal Srivastava ToxiM: A Toxicity Prediction Tool for Small Molecules Developed Using Machine Learning and Chemoinformatics Approaches Frontiers in Pharmacology 2017
111 Abhijit Maji Richa Misra Darshan Dhakan Vineet K Sharma Rup Lal Yogendra Singh Gut microbiome contributes to impairment of immunity in pulmonary tuberculosis patients by alteration of butyrate and propionate producers Environmental Microbiology 2017
112 Muralikrishna Lella Radhakrishnan Mahalakshmi Metamorphic Proteins: Emergence of dual protein folds from one primary sequence. Biochemistry 2017
113 Bharat Iyer Punit Zadafiya Pallavi Vetal Radhakrishnan Mahalakshmi Energetics of side chain partitioning of β-signal residues in unassisted folding of a transmembrane β-barrel protein. Journal of Biological Chemistry 2017
114 Bylapudi Ganesh Manika Indrajit Singh Vikas Jain On the domains of T4 phage sliding clamp gp45: an intermolecular crosstalk governs structural stability and biological activity. BBA-General Subjects 2017
115 Ajith Ashokan Vinita Gowda Diversity of the genus Hedychium J. Koenig (Zingiberaceae) in the Northeast of India-I. Heliconia Society International Bulletin. 2017
116 Amit K Verma Danish Diwan Sandeep Raut Neha Dobriyal Rebecca E Brown Vinita Gowda Justin K Hines Chandan Sahi Evolutionary Conservation and Emerging Functional Diversity of the Cytosolic Hsp70:J Protein Chaperone Network of Arabidopsis thaliana. G3: Genes Genomes Genetics 2017
117 Vineet K. Sharma Namita Misra Cecile Clavaud Parul Mittal Rituja Saxena The microbial and functional diversity of the microflora present on the scalps of Indian subjects with and without dandruff Journal of Investigative Dermatalogy 2017
118 Kuldeep Verma sunando datta Heavy subunit of cell surface Gal/GalNAc lectin (Hgl) undergoes degradation via endo-lysosomal compartments in Entamoeba histolytica. Small GTPases 2017
119 Jerome Gilleron sandra Lacas-Jarvais Sameena Parveen Jini Sugatha Amulya Priya Sunando Datta Essential and selective role of SNX12 in transport of endocytic and retrograde cargo Journal of Cell Science 2017
120 Kuldeep Verma The monomeric GTPase Rab35 regulates phagocytic cup formation and phagosomal maturation in Entamoeba histolytica Journal of Biological Chemistry 2017
121 Rituja Saxena Parul Mittal Namita Misra Cecile clavaud The microbial and functional diversity of the microflora present on the scalps of Indian subjects with and without dandruff Journal of Investigative Dermatology 2017
122 Himanshu Kumar Adrian Bot Role of immune cells, immune modulating factors and immunotoxins in cancer immunotherapy International Reviews of Immunology 2017
123 Himanshu Kumar Adrian Bot Role of MicroRNAs in shaping innate immunity and as therapeutic targets for autoimmune diseases International Reviews of Immunology 2017
124 Sathiya Pandi Narayanan Smriti Singh Sanjeev Shukla A saga of cancer epigenetics: linking epigenetics to alternative splicing Biochemical J 2017
125 Palash Sarkar Shashank Singh A simple method for obtaining relations among factor basis elements for special hyperelliptic curves Applicable Algebra in Engineering, Communication and Computing 2017
126 Parini Surti Bhawna Burdak Svetlana Rajkumar Maurya Radhakrishnan Mahalakshmi Manoj S Patel Vikas Jain Structural plasticity of T4 transcription co-activator gp33 revealed by a protease-resistant unfolded state Biochemical and Biophysical Research Communications 2017
127 Amit K Verma Yogesh Tak Susrita Sarkar Prerna Tripathi Neha Dobriyal Chandan Sahi Partial dispensability of Djp1's J domain in peroxisomal protein import in Saccharomyces cerevisiae results from genetic redundancy with another class II J protein, Caj1 Cell Stress and Chaperones 2017
128 Radhakrishnan Mahalakshmi Svetlana Maurya Mitochondrial VDAC2 and cell homeostasis: highlighting hidden structural features and unique functionalities. Biological Reviews 2017
129 Ram Kumar Mishra Mansi Gujrati Vaibhav Kumar Shukla Jai Shankar Singh Ashutosh Kumar Backbone and side-chain resonance assignments of Plasmodium falciparum SUMO Biomolecular NMR assignments 2017
130 Bhagaban Mallik Vimlesh Kumar Regulation of actin-Spectrin Cytoskeleton by ICA69 at the Drosophila Neuromuscular Junction Communicative and Integrative Biology 2017
131 Rupali Yadav Vijay Sherivastava Watanabe Natsuki Priya Tomar Madhumita Mukherjee samudrala Gourinath Kumiko Nakada-Tsukai Tomoyoshi Nozaki Sunando Datta Structural and thermodynamic characterization of metal binding in Vps29 from Entamoeba histolytica: Implication in retromer function. Molecular Microbiology 2017
132 Ajit Chande Claudia Firrito Massimo Pizzato SERINC5: not all splice variants work against HIV Journal of Public Health and Emergency 2017
133 Atul Samaiya Rajendra Kumar Panday Sandhya Yadav Neha Ahuja Amit Gupta Kajal Biswas Sathiya Pandi Narayanan Smriti Singh Shyam K Sharan Sanjeev Shukla Intragenic DNA methylation and BORIS-mediated cancer-specific splicing contribute to the Warburg effect Proceedings of the National Academy of Sciences 2017
134 Himanshu Kumar Adrian Bot Innate immunity and infectious diseases–An update International Reviews of Immunology 2017
135 Himanshu Kumar Adrian Bot Antibodies in pathogenesis and management of diseases International Reviews of Immunology 2017
136 Soumya Kamilla Vikas Jain Robust high throughput real-time monitoring assay for the specific screening of bacterial cell envelope inhibitors Proceedings of the Indian National Science Academy 2017
137 Himanshu Joshi Vikas Jain Novel method to rapidly and efficiently lyse Escherichia coli for the isolation of recombinant protein Analytical Biochemistry 2017
138 Manika Indrajit Singh Vikas Jain Identification and characterization of an inside-out folding intermediate of T4 phage sliding clamp Biophysical Journal 2017
139 Amit K. Verma Vinita Gowda Rebecca E. Brown Neha Dobriyal Sandeep Raut Danish Diwan Justin K. Hines Chandan Sahi Evolutionary Conservation and Emerging Functional Diversity of the Cytosolic Hsp70:J Protein Chaperone Network of Arabidopsis thaliana. G3: Genes Genomes Genetics 2017
140 Arpan Parichha Bhagban Mallik Sandeep Raut Chandan Sahi Vimlesh Kumar RNAi-Mediated Reverse Genetic Screen Identified Drosophila Chaperones Regulating Eye and Neuromuscular Junction Morphology. G3: Genes Genomes Genetics 2017
141 vineet k sharma sudheer gupta ashok sharma vibhuti shastri midhun madhu Prediction of Anti-inflammatory proteins/peptides: an insilico approach. Journal of Translational Medicine 2017
142 vineet k sharma shubham jaiswal rituja saxena Draft Genome Sequence of Pseudomonas hussainii Strain MB3, a Denitrifying Aerobic Bacterium Isolated from the Rhizopheric Region of Mangrove Trees in the Andaman Islands, India. Genome Announcements 2017
143 vineet k sharma parul mittal rituja saxena Draft Genome Sequence of Anoxybacillus mongoliensis Strain MB4, a Sulfur-Utilizing Aerobic Thermophile Isolated from a Hot Spring in Tattapani, Central India. Genome Announcements 2017
144 Nikhil Chaudhary Ankit Gupta vineet k sharma BioFuelDB: a database and prediction server of enzymes involved in biofuels production. Journal of Biomolecular Structure and Dynamics 2017
145 vineet k sharma ashok sharma nikhil chaudhary Shubham jaiswal .A novel approach for the prediction of species-specific biotransformation of xenobiotic/drug molecules by human gut microbiota. Scientific Reports 2017
146 vineet k sharma sudheer gupta parul mittal midhun k madhu IL17eScan: a tool for the identification of peptides inducing IL-17 response. Frontiers in Immunology 2017
147 Neelam D Patidar Venkatesan Suryanarayanan Surya P Seniya Himanshu Joshi Sanjeev K Singh Vikas Jain Dissecting the structure–function relationship in lysozyme domain of mycobacteriophage D29-encoded peptidoglycan hydrolase FEBS Letters 2017
148 Pilendra Singh Tomar Bahadur Kumar Thakre Biological Sciences SK Raghuvir Patra A Pyridoindole-Based Multifunctional Bioprobe: pH-Induced Fluorescence Switching and Specific Targeting of Lipid Droplets Chemistry -Asian Journal 2017
149 Raghuvir S Tomar Sakshi Chauhan Swati Swagatika Upendarrao Golla A systematic assessment of chemical, genetic, and epigenetic factors influencing the activity of anticancer drug KP1019 (FFC14A) Oncotarget 2017
150 Puja Kumari Himanshu Kumar Viral Deubiquitinases: Role in Evasion of Anti-viral Innate Immunity Critical Reviews in Microbiology 2017
151 Shalabh Mishra Himanshu Kumar Balancing Anti-viral innate immunity and immune homeostasis Cellular & molecular Immunology 2017
152 Puja Kumari Irene Saha Athira Narayanan Sathish Narayanan Akinori Takaoka Nachimuthu Senthil Kumar Prafullakumar Tailor Himanshu Kumar Essential role of HCMV deubiquitinase in promoting oncogenesis by targeting anti-viral innate immune signaling pathways Cell Death and Disease 2017
153 Bhagaban Mallik Manish Kumar Dwivedi Zeeshan Mushtaq Manisha Kumari Praveen Kumar Verma Vimlesh Kumar Regulation of Neuromuscular Junction Organization by Rab2 and its Effector ICA69 in Drosophila Development 2017
154 Saumitra Dey Choudhury Altered Translational Repression of an RNA-binding Protein, elav by AOA2-causative Senataxin Mutation Synapse 2017
155 Sandeep Raut Bhagaban Mallik Arpan Parichha Amrutha V Chandan Sahi Vimlesh Kumar RNAi-mediated Reverse Genetic Screen Identified Drosophila Chaperones Regulating Eye and Neuromuscular Junction Morphology G3: Genes Genomes Genetics 2017
156 Radhakrishnan Mahalakshmi Svetlana Maurya Bhavna Burdak Parini Surti Manoj Patel Vikas Jain Structural plasticity of T4 transcription co-activator gp33 revealed by a protease-resistant unfolded state Biophysical and Biochemical Research Communication 2017
157 Deepti Chaturvedi Radhakrishnan Mahalakshmi Transmembrane β-barrels: Evolution, folding and energetics. Biochim. Biophys. Acta (Biomembranes) 2017
158 Muralikrishna Lella Radhakrishnan Mahalakshmi Engineering a Transmembrane Nanopore Ion Channel from a Membrane Breaker Peptide. The Journal of Physical Chemistry Letters 2016
159 Saumitra Dey Choudhury Zeeshan Mushtaq Suneel Reddi-Alla Sruthi S Balakrishnan Rajan S Thakur KS Krishnan Padinjat Raghu Mani Ramaswami Vimlesh Kumar sigma2-adaptin Facilitates Basal Synaptic Transmission and is required for Regenerating Endo- Exo Cycling Pool under High Frequency Nerve Stimulation in Drosophila GENETICS 2016
160 Zeeshan Mushtaq Saumitra Dey Choudhury Sri Krishna Gangwar Genny Orso Vimlesh Kumar Human Senataxin Modulates Structural Plasticity of the Neuromuscular Junction in Drosophila through a Neuronally Conserved TGFβ Signalling Pathway Neurodegenerative Diseases 2016
161 Madhumita Mukherjee MIntu Chandra Kuldeep Verma Rupali Yadav Sunando Datta Biophysical studies on calcium and carbohydrate binding to carbohydrate recognition domain of Gal/GalNAc lectin from Entamoeba histolytica: insights into host cell adhesion. J. Biochemistry 2016
162 Sudheer Gupta Midhun K. Madhu Ashok K. Sharma Vineet K. Sharma ProInflam: a webserver for the prediction of proinflammatory antigenicity of peptides and proteins Journal of Translational Medicine 2016
163 Vineet K. Sharma Darshan Dhakan Harish K. Sanjiv Kumar Ashok K. Sharma Prediction of peptidoglycan hydrolases- a new class of antibacterial proteins BMC Genomics 2016
164 Vineet K. Sharma Ashok K. Sharma Harish K. Vishnu P.K. Prasoodanan Sanjiv Kumar Ankit Gupta Reconstruction of Bacterial and Viral Genomes from Multiple Metagenomes Frontiers in Microbiology 2016
165 Vineet K. Sharma Nikhil Chaudhary Rituja Saxena Darshan Dhakan Draft Genome Sequence of Tepidimonas taiwanensis Strain MB2, a Chemolithotrophic Thermophile Isolated from a Hot Spring in Central India American Society of Microbiology All-Inclusive Package 2016
166 S. D. Das Kusum Dhochak Vikram Tripathi Kondo route to spin inhomogeneities in the honeycomb Kitaev model Physical Review B 2016
167 Rituja Saxena Vineet K. Sharma A Metagenomic Insight Into the Human Microbiome: Its Implications in Health and Disease Medical and Health Genomics 2016
168 Tomoyoshi Nozaki Yumiko Saito-Nakano Mintu Chandra Vijay Srivastava Sunando Datta Crystal Structure Analysis of Wild Type and Fast Hydrolyzing Mutant of EhRabX3, a Tandem Ras Superfamily GTPase from Entamoeba histolytica Journal of Molecular Biology 2016
169 Raghuvir Singh T Mandal Papita Sakshi Chauhan The biochemical analysis reveals multifactorial mechanism of histone H3 clipping by Chicken Liver Histone H3 protease Biochemistry 2016
170 Manika Indrajit Singh Abhishek Anil Dubey Vikas Jain Rapid and robust PCR-based all-recombinant cloning methodology PLoS One 2016
171 Gajendra Azad Partial purification of histone H3 proteolytic activity from budding yeast Saccharomyces cerevisiae Yeast 2016
172 Muralikrishna Lella Soumya Kamilla Vikas Jain Radhakrishnan Mahalakshmi Molecular mechanism of holin transmembrane domain I in pore formation and bacterial cell death ACS Chemical Biology 2016
173 Sakshi Chauhan Efficient expression and purification of biologically active human cystatin proteins Protein Expression and Purification 2016
174 Sunando Datta Tomo Nozaki Kuldeep Verma Role of EhRab7A in phagocytosis of type 1 fimbriated E. coli by Entamoeba histolytica. Molecular Microbiology 2016
175 Mintu Chandra Sunando Datta Role of cysteine residues in the redox-regulated oligomerization and nucleotide binding to EhRabX3. Molecular and Biochemical Parasitology 2016
176 Vikash Gajendra Kumar Azad Upendarao Golla Pushpendra Kumar Sahu Santhosh Kumar Sariki Raghuvir Singh T Sen1, the homolog of human Senataxin, is critical for survival through regulation of cellular redox homeostasis, mitochondrial function and TOR in Saccharomyces cerevisiae FEBS Journal 2016
177 Upendarrao Golla Deepthi Joseph Raghvir Singh Tomar Combined Transcriptomics and Chemical-Genetics Reveal Molecular Mode of Action of Valproic acid, an Anticancer Molecule using Budding Yeast Model Scientific Reports 2016
178 Mintu Chandra Runjhun Saran Sunando Datta Deciphering the role of Atg5 in nucleotide dependent interaction of Rab33B with the dimeric complex, Atg5-Atg16L1. Chandra M, Saran R, Datta S. Biophysical and Biochemical Research Communication 2016
179 Nazmul Haque Sanjeev Shukla Kyster K Nanan Maria F Prigge Garima Verma Morgan Thenoz Marc A Bailly David Sturgill Ryan J Marina Shalini Oberdoerffer TET-catalyzed oxidation of intragenic 5-methylcytosine regulates CTCF-dependent alternative splicing EMBO J 2016
180 Svetlana Maurya Radhakrishnan Mahalakshmi Control of human VDAC-2 scaffold dynamics by interfacial tryptophans is position specific. Biochim. Biophys. Acta (Biomembranes) 2016
181 Priya Vijayakumar Sourav Datta Liam Dolan RSL4 promotes root hair elongation by transcriptionally regulating the expression of genes required for cell growth. New Phytologist 2016
182 Mohan Reddy Bodireddy Ranjeet Singh Mahla P Md Khaja Mohinuddin G Trivikram Reddy D Vijaya Raghav Prasad Himanshu Kumar Discovery of a new class of 16-membered (2Z, 11Z)-3, 11-di (aryl/naphthyl)-1, 13-dioxa-5, 9-dithia-2, 12-diazacyclohexadeca-2, 11-dienes as anti-tumor agents RSC Advances 2016
183 Diwakar D Kulkarni Himanshu Kumar Pradip N Gandhale Periyasamy Vijakumar Anamika Mishra Pradip B Ranaware Ashwin Ashok Raut Genome Wide Host Gene Expression Analysis in Chicken Lungs Infected with Avian Influenza Viruses PLoS One 2016
184 Mohammed Fawaz Periyasamy Vijaykumar Anamika Mishra Pradip N Gandhale Rupam Dutta Nitin M Kamble Shashi B Sudhakar Parimal Roychoudhary Himanshu Kumar Diwakar D Kulkarni Ashwin Ashok Raut Duck gut viral metagenome analysis captures snapshot of viral diversity. BMC Genomics 2016
185 Vineet K Sharma Prediction of Biofilm Inhibiting Peptides: An In Silico Approach. Frontiers in Microbiology 2016
186 Ram Kumar Mishra Mansi Gujrati Somnath D Bhagat Prabhu S Yavvari Abhishek Chanchal Munazza T Fatima Aasheesh Srivastava Cell Permeating Nano-Complexes of Amphiphilic Polyelectrolytes Enhance Solubility, Stability, and Anti-Cancer Efficacy of Curcumin Biomacromolecules 2016
187 vineet k sharma rituja saxena darshan dhakan parul mittal Metagenomic Analysis of Hot Springs in Central India Reveals Hydrocarbon Degrading Thermophiles and Pathways Essential for Survival in Extreme Environments. Frontiers in Microbiology 2016
188 Chetana Ajit Tamadaddi Chandan Sahi J domain independent functions of J proteins Cell Stress and Chaperones 2016
189 Gajendra Kumar Azad Raghuvir Singh Tomar The multifunctional transcription factor Rap1: a regulator of yeast physiology Frontiers Bioscience 2016
190 Raghuvir Singh Tomar Amit Kumar Mondal Amit Adhikary Upendarrao Golla Sanjit Konar Synthesis, structure, magnetic and biological activity studies of bis-hydrazone derived Cu(II) and Co(II) coordination compounds Dalton Transactions 2016
191 Manika Indrajit Singh Vikas Jain Molecular dissection of the homotrimeric sliding clamp of T4 phage: Two domains of a subunit display asymmetric characteristics Biochemistry 2016
192 Soumya Kamilla Vikas Jain Mycobacteriophage D29 holin C-terminal region functionally assists in holin aggregation and bacterial cell death FEBS Journal 2016
193 Angela Anna Messina Matteo Ceccarelli Salvatore Foti Andrea Magrì Mariano Andrea Scorciapino Francesca Guarino Carlo Guardiani Deepti Chaturvedi Ankit Gupta Rosaria Saletti Vanessa Checchetto Simona Reina Radhakrishnan Mahalakshmi Ildiko Szabo Vito De Pinto VDAC3 as a sensor of oxidative state of the intermembrane space of mitochondria: the putative role of cysteine residue modifications. Oncotarget 2016
194 Radhakrishnan Mahalakshmi Svetlana Rajkumar Maurya VDAC-2: Mitochondrial outer membrane regulator masquerading as a channel? FEBS Journal 2016
195 Vikas Jain Soumya Kamilla Muralikrishna Lella Radhakrishnan Mahalakshmi Molecular Mechanism of Holin Transmembrane Domain I in Pore Formation and Bacterial Cell Death. ACS Chemical Biology 2016
196 Radhakrishnan Mahalakshmi Kamlesh Madhusudan Makwana Stereopositional Outcome in the Packing of Dissimilar Aromatics in Designed beta-Hairpins Chemistry - A European Journal 2016
197 Angela A. Messina Matteo Ceccarelli Salvatore Foti Andrea Magrì Mariano Andrea Scorciapino Francesca Guarino Carlo Guardiani Deepti Chaturvedi Ankit Gupta Rosaria Saletti Vanessa Checchetto Simona Reina Radhakrishnan Mahalakshmi Ildiko Szabo Vito De Pinto Unexpected Modifications of Cysteines in VDAC3: Indication that VDAC3 may Signal the Mitochondrial Intermembrane Redox State Biophysical Journal 2016
198 Radhakrishnan Mahalakshmi Angela Messina Ankit Gupta Simona Reina Vito De Pinto Role of cysteines in mammalian VDAC isoforms' function. Biochim. Biophys. Acta (Bioenergetics) 2016
199 Radhakrishnan Mahalakshmi Kamlesh Madhusudan Makwana Capping beta-Hairpin with N-terminal D-Amino Acid Stabilizes Peptide Scaffold. Biopolymers 2016
200 Gajendra Kumar Azad Vikash Singh Shivani Barnawal Mayur J Thakare Raghuvir Singh Tomar The transcription factor Rap1p is required for tolerance to cell wall-perturbing agents and for cell wall maintenance in Saccharomyces cerevisiae FEBS Lett. 2015
201 Vikash Singh Gajendra Kumar Azad Santhosh Kumar Sariki Raghuvir Singh Tomar Flocculation in Saccharomyces cerevisiae is regulated by RNA/DNA helicase Sen1p FEBS Lett. 2015
202 Upendarrao Golla Bandi Goutham Raghuvir Singh Tomar Molecular Cytotoxicity Mechanisms of the Herbicide Allyl Alcohol (Acrolein) in Budding Yeast Chemical Research in Toxicology 2015
203 Amol Arunrao Pohane Vikas Jain Insights into the regulation of bacteriophage endolysin: Multiple means to the same end Microbiology 2015
204 Vineet K. Sharma Darshan Dhakan Nikhil Chaudhary Rituja Saxena Draft Genome Sequence of Gulbenkiania mobilis Strain MB1, a Sulfur-Metabolizing Thermophile Isolated from a Hot Spring in Central India Genome Announcements 2015
205 Ashok K. Sharma Ankit Gupta Sanjiv Kumar Darshan Dhakan Vineet K. Sharma Woods: A fast and accurate functional annotator and classifier of genomic and metagenomic sequences Genomics 2015
206 Ankit Gupta Vineet K. Sharma Using the taxon-specific genes for the taxonomic classification of bacterial genomes BMC Genomics 2015
207 Nikhil Chaudhary Ashok K. Sharma Piyush Agarwal Ankit Gupta Vineet K. Sharma 16S Classifier: A Tool for Fast and Accurate Taxonomic Classification of 16S rRNA Hypervariable Regions in Metagenomic Datasets PLoS One 2015
208 Merlyn Emmanuel Yumiko Saito-Nakano Tomoyoshi Nozaki Sunando Datta Small GTPase Rab21 mediates fibronectin induced actin reorganization in Entamoeba histolytica: implications in pathogen invasion. PLOS Pathogen 2015
209 Neelam Devidas Patidar Amol Arunrao Pohane Vikas Jain Modulation of domain-domain interaction and protein's function by a charged linker: A case study of mycobacteriophage D29 endolysin. FEBS Letters 2015
210 Aashish Sharma Amol Arunrao Pohane Sandhya Bansal Avinash Bajaj Vikas Jain Aasheesh Srivastava Cell Penetrating Synthetic Antimicrobial Peptides (SAMPs) Exhibiting Potent and Selective Killing of Mycobacterium by Targeting Its DNA Chemistry - A European Journal 2015
211 David Lambright Yannis Kalaidzidis Amulya Priya Inna Kalaidzidis Sunando Datta Molecular insights into Rab7-mediated endosomal recruitment of core retromer: deciphering the role of Vps26 and Vps35. Traffic 2015
212 Kuldeep Verma Insights into endosomal maturation of human holo-transferrin in the enteric parasite Entamoeba histolytica: essential roles of Rab7A and Rab5 in biogenesis of giant early endocytic vacuoles. Cellular Microbiology 2015
213 Sathiya Pandi Narayanan Smriti Singh Amit Gupta Sandhya Yadav Shree Ram Singh Sanjeev Shukla Integrated genomic analyses identify KDM1A’s role in cell proliferation via modulating E2F signaling activity and associate with poor clinical outcome in oral cancer Cancer Letters 2015
214 Puja Kumari Sathish Narayanan Himanshu Kumar Herpesviruses: interfering innate immunity by targeting viral sensing and interferon pathways Reviews in Medical Virology 2015
215 Himanshu Kumar Ashwin Ashok Raut Akinori Takaoka Shizuo Akira Taro Kawai Ashish Kumar Ranjeet Singh Mahla Shalabh Mishra Harshad Ingle Sushil Kumar IPS-1 differentially induces TRAIL, BCL2, BIRC3 and PRKCE in type I interferons-dependnt and independent anticancer activity Cell Death and Disease 2015
216 Anamika MIshra Ashwin Ashok Raut Sushil Kumar Harshad Ingle Diwakar Dattatraya Kulkarni Takeshi Kameyama Akinori Takaoka Shizuo Akira Himanshu Kumar The microRNA miR-485 targets host and influenza virus transcripts to regulate antiviral immunity and restrict viral replication Science Signaling 2015
217 Liam Dolan Helen Prescott Sourav Datta Intensity of a pulse of RSL4 transcription factor synthesis determines Arabidopsis root hair cell size. Nature Plants 2015
218 Kirtimaan Syal Himanshu Joshi Dipankar Chatterji Vikas Jain Novel pppGpp binding site at the C-terminal region of Rel enzyme from Mycobacterium smegmatis FEBS Journal 2015
219 Svetlana Rajkumar Maurya Deepti Chaturvedi Bharat Ramasubramanian Iyer Ankit Gupta Radhakrishnan Mahalakshmi Thermodynamic, structural and functional properties of membrane protein inclusion bodies are analogous to purified counterparts: Case study from bacteria and humans. RSC Advances 2015
220 Kamlesh Makwana Radhakrishnan Mahalakshmi Nature of aryl-tyrosine interactions contribute to beta-hairpin scaffold stability: NMR evidence for alternate ring geometry. Phys. Chem. Chem. Phys. 2015
221 Radhakrishnan Mahalakshmi Folding and stability of transmembrane beta-barrels of bacterial and human origin: Probing underlying similarities and principal differences using in vitro systems. Proc. Indian Natn. Sci. Acad. 2015
222 Radhakrishnan Mahalakshmi Kamlesh Madhusudan Makwana NMR Analysis of Tuning Cross-Strand Phe/Tyr/Trp - Trp Interactions in Designed beta-Hairpin Peptides: Terminal Switch from L- to D-Amino Acid as a Strategy for beta-Hairpin Capping. J. Phys. Chem. B 2015
223 Radhakrishnan Mahalakshmi Kamlesh Madhusudan Makwana Trp-Trp Cross-Linking: A Structure-Reactivity Relationship in the Formation and Design of Hyperstable Peptide beta-Hairpin and alpha-Helix Scaffolds. Organic Letters 2015
224 Radhakrishnan Mahalakshmi Kamlesh Madhusudan Makwana Structure Stabilizing Role of Aromatic Interactions is Decided by Spatial Arrangement of Aromatic Pairs: A Case Study With Designed Peptide beta-Hairpins. Peptides 2015
225 Bharat Ramasubramanian Iyer Radhakrishnan Mahalakshmi Residue-dependent thermodynamic cost and barrel plasticity balances activity in the PhoPQ-activated enzyme PagP of Salmonella typhimurium Biochemistry 2015
226 Radhakrishnan Mahalakshmi Kamlesh Madhusudan Makwana Implications of Aromatic-Aromatic Interactions: From Protein Structures to Peptide Models. Protein Science 2015
227 Radhakrishnan Mahalakshmi Svetlana Rajkumar Maurya N-helix and cysteines inter-regulate human mitochondrial VDAC-2 function and biochemistry. Journal of Biological Chemistry 2015
228 Gajendra Kumar Azad Vikash Singh Raghuvir Singh Tomar Assessment of the biological pathways targeted by isocyanate using N-succinimidyl N-methylcarbamate on budding yeast Saccharomyces cerevisiae. PLoS One 2014
229 Shivani Baranwal Amrendar M Reddy Papita Mandal Gajendra Kumar Azad Vikash Singh Raghuvir Singh Tomar Anti-cancer drug KP1019 induces Hog1 phosphorylation and protein ubiquitination in Saccharomyces cerevisiae Eur J. Pharmacology 2014
230 Vikash Singh Gajendra Kumar Azad Papita Mandal Amrendar M Reddy Raghuvir Singh Tomar Anti-cancer drug KP1019 modulates epigenetics and induces DNA damage response in Saccharomyces cerevisiae FEBS Lett. 2014
231 Shivani Barnawal Gajendra Kumar Azad Vikash Singh Raghuvir Singh Tomar Signaling of chloroquine-induced stress in the yeast Saccharomyces cerevisiae requires the Hog1 and Slt2 MAPK Pathways Antimicrobial Agents and Chemotherapy 2014
232 Papita Mandal Sakshi Chauhan Raghuvir Tomar H3 clipping activity of glutamate dehydrogenase is regulated by stefin B and chromatin structure FEBS Journal 2014
233 Gajendra Kumar Azad Vikash Singh Mayur J Thakare Shivani Barnawal Raghuvir Singh Tomar Mitogen-activated protein kinase Hog1 is activated in response to curcumin exposure in the budding yeast Saccharomyces cerevisiae BMC Microbiology 2014
234 Gajendra Kumar Azad Vikash Singh Papita Mandal Prabhat Singh Upendarrao Golla Sakshi Chauhan Shivani Barnawal Raghuvir Singh Tomar Ebselen induces reactive oxygen species (ROS)-mediated cytotoxicity in Saccharomyces cerevisiae with inhibition of glutamate dehydrogenase being a target FEBS Open Biol 2014
235 Sanjit Konar Soumyabrata Goswami Qysar Maqbool Aasheesh Srivastava Transparent, free-standing, flexible and selective CO 2 adsorbent films fabricated from homopolymer/metal salt hybrid gels Journal of Materials Chemistry A, B and C 2014
236 Amarendar Reddy M Aasheesh Srivastava Mechano-responsive gelation of water by a short alanine-derivative Soft Matter 2014
237 Ankit Gupta Rohan Kapil Darshan Dhakan Vineet K. Sharma MP3: A Software Tool for the Prediction of Pathogenic Proteins in Genomic and Metagenomic Data PLoS One 2014
238 Vineet K. Sharma Members of International Glossina Genome Initiative Genome Sequence of the Tsetse Fly (Glossina morsitans): Vector of African Trypanosomiasis Science 2014
239 Sunando Datta Mintu Chandra Vijay Srivastava Crystallization and preliminary X-ray analysis of RabX3, a tandem GTPase from Entamoeba histolytica Acta Crystallographica section F 2014
240 Srinivas Samala Pragyan Pallavi Ravi Kumar Rajesh K Arigela Gajendra Singh Ravi Sankar Ampapathi Amulya Priya Sunando Datta Abhijit Patra Bijoy Kundu One-Pot Synthesis of Highly Fluorescent Pyrido[1,2-a]indole Derivatives through CH/NH Activation: Photophysical Investigations and Application in Cell Imaging Chemistry - A European Journal 2014
241 Dilraj Lama Himanshu Joshi Bylapudi Ganesh Lakhan Ekal Vikas Jain Evidence of a conserved intrinsically disordered region in the C-terminus of the stringent response protein Rel from mycobacteria. FEBS Letters 2014
242 Amol Arunrao Pohane Himanshu Joshi Vikas Jain Molecular dissection of phage endolysin: An interdomain interaction confers host specificity in Lysin A of Mycobacterium phage D29. Journal of Biological Chemistry 2014
243 Papita Mandal Naveen Verma Gajendra Kumar Azad Vikash Singh Upendarrao Golla Raghuvir Singh Tomar Epigenetics: Role of histone proteases in cellular functions and diseases. A book chapter in ‘Molecular Mechanisms and Physiology of Disease: Implications for Epigenetics and Health’. Maulik, N.; Karagiannis, T. (Eds.) Springer press 2014
244 Gajendra Kumar Azad Raghuvir Singh Tomar The emerging role of histone proteases in regulation of various biological processes Molecular Biology Reports 2014
245 Gajendra Kumar Azad Raghuvir Singh Tomar A comprehensive review illustrating the mode of action and biological pathways targeted by promising antioxidant drug, ebselen Molecular Biology Reports 2014
246 Mintu Chandra Madhumita Mukherjee Vijay Srivastava Yumiko Saito-Nakano Tomoyoshi Nozaki Sunando Datta Insights into the GTP/GDP cycle of RabX3, a novel GTPase from Entamoeba histolytica with tandem G-domains. Biochemistry 2014
247 Raunaq Singh Nagi Ashish Shekhar Bhat Himanshu Kumar Cancer: a tale of aberrant PRR response Frontiers in Immunology 2014
248 Deepak Bharti Ashish Kumar Ranjeet Singh Mahla Sushil Kumar Harshad Ingle Hari Shankar Beenu Joshi Ashwin Ashok Raut Himanshu Kumar The role of TLR9 polymorphism in susceptibility to pulmonary tuberculosis Immunogenetics 2014
249 Kuntal Roy Electric-field induced magnetization switching in interface-coupled multiferroic heterostructures: A highly-dense, non-volatile, and ultra-low-energy computing paradigm Jl. Of Physics D- Applied Physics 2014
250 Radhakrishnan Mahalakshmi Svetlana Rajkumar Maurya Influence of Protein - Micelle Ratios and Cysteine Residues on the Kinetic Stability and Unfolding Rates of Human Mitochondrial VDAC-2 PLoS One 2014
251 Radhakrishnan Mahalakshmi Kamlesh Madhusudan Makwana Comparative analysis of cross strand aromatic-Phe interactions in designed peptide beta-hairpins. Organic & Biomolecular Chemistry 2014
252 Radhakrishnan Mahalakshmi Svetlana Rajkumar Maurya Cysteine Residues Impact the Stability and Micelle Interaction Dynamics of the Human Mitochondrial beta-barrel Anion Channel hVDAC-2. PLoS One 2014
253 Radhakrishnan Mahalakshmi Ravikiran Boddepalli Unusual post-translational protein modifications : The benefits of sophistication. RSC Advances 2014
254 Radhakrishnan Mahalakshmi Punit Zadafiya Ankit Gupta Differential Contribution of Tryptophans to the Folding and Stability of the Attachment Invasion Locus Transmembrane beta-Barrel from Yersinia pestis. Scientific Reports 2014
255 Kamlesh Madhusudan Makwana Radhakrishnan Mahalakshmi Asymmetric contribution of aromatic interactions stems from spatial positioning of the interacting aryl pairs in beta-hairpins ChemBioChem 2014
256 Radhakrishnan Mahalakshmi Deepti Chaturvedi Juxtamembrane tryptophans possess distinct roles in defining the OmpX barrel-micelle boundary and packing-facilitated protein-micelle association FEBS Lett. 2014
257 Papita Mandal Naveen Verma Sakshi Chauhan Raghuvir Singh Tomar Unexpected histone H3 tail clipping activity of Glutamate dehydrogenase Journal of Biological Chemistry 2013
258 Upendarrao Golla Vikash Singh Gajendra Kumar Azad Prabhat Singh Papita Mandal Raghuvir Singh Tomar Sen1p contributes to genomic integrity by regulating expression of Ribonucleotide reductase 1 (RNR1) in Saccharomyces cerevisiae PLoS One 2013
259 Gajendra Kumar Azad Vikash Singh Upendarrao Golla Raghuvir Singh Tomar Depletion of cellular iron by curcumin leads to alteration in histone acetylation and degradation of Sml1p in Saccharomyces cerevisiae. PLoS One 2013
260 Kashyap Rajeevsarathy Roots of Dehn twists about separating curves Jl. Of the Australian Mathematical Society 2013
261 Santosh Ranjan Mohanty Bharati Kollah Vineet Kumar Sharma Amar Bahadur Singh Muneshwar Singh A. Subba Rao Methane oxidation and methane driven redox process during sequential reduction of a flooded soil ecosystem Annals of Microbiology 2013
262 Virender Batish Rashmi H. Mallapa Vineet K. Sharma Sunita Grover Draft Genome Sequence of Lactobacillus plantarum Strain Lp91, a Promising Indian Probiotic Isolate of Human Gut Origin Genome Announcements 2013
263 Sunita Grover Vineet K. Sharma Rashmi H. Mallapa Virender K. Batish Draft Genome Sequence of Lactobacillus fermentum Lf1, an Indian Isolate of Human Gut Origin Genome Announcements 2013
264 Manika Indrajit Singh Vikas Jain Tagging the Expressed Protein with 6 Histidines: Rapid Cloning of an Amplicon with Three Options. PLoS One 2013
265 Manonmani Arunachalam Sunando Datta Vineet Sadarangani New players in the same old game: a system level in silico study to predict type III secretion system and effector proteins in bacterial genomes reveals common themes in T3SS mediated pathogenesis. BMC Research Notes 2013
266 Ranjit Singh Mahla Madhawa C Reddy D. Vijaya Raghava Prasad Himanshu Kumar Sweeten PAMPs: Role of Sugar Complexed PAMPs in Innate Immunity and Vaccine Biology Frontiers in Immunology 2013
267 Sushil Kumar Harshad Ingle DVR Prasad Himanshu Kumar Recognition of Bacterial Infection by Innate Immune Sensors. Critical Reviews in Microbiology Critical Reviews in Microbiology 2013
268 Himanshu Kumar Adrian Bot Innate immune recognition mechanism and Translational Opportunities, an Editorial for special issue International Reviews of Immunology 2013
269 M Baranowski H Y Yu T Ziegelhoffer J Kominek Chandan Sahi J Marszalek E A Craig Sequential duplications of an ancient member of the DnaJ-family expanded the functional chaperone network in the eukaryotic cytosol. Mol Biol Evol 2013
270 G L Ciesielski M Plotka M Manicki B A Schilke R Dutkiewicz Chandan Sahi J Marszalek E A Craig Nucleoid localization of Hsp40 Mdj1 is important for its function in maintenance of mitochondrial DNA. Biochim Biophys Acta 2013
271 Radhakrishnan Mahalakshmi Deepti Chaturvedi Svetlana Rajkumar Maurya Modulating lipid dynamics and membrane fluidity to drive rapid folding of a transmembrane barrel Scientific Reports 2013
272 Radhakrishnan Mahalakshmi Svetlana Rajkumar Maurya Modulation of human mitochondrial voltage-dependent anion channel 2 (hVDAC-2) structural stability by cysteine-assisted barrel-lipid interactions. Journal of Biological Chemistry 2013
273 Radhakrishnan Mahalakshmi SR Raghothama Kamlesh Madhusudan Makwana Stabilizing effect of electrostatic vs aromatic interactions in diproline nucleated peptide beta-hairpins. Phys. Chem. Chem. Phys. 2013
274 Radhakrishnan Mahalakshmi Muralikrishna Lella Pro-Gly mediated conformational switch of Mycobacteriophage D29 holin transmembrane domain I is lipid concentration driven. Chemical Communications 2013
275 Radhakrishnan Mahalakshmi Deepti Chaturvedi Methionine Mutations of Outer Membrane Protein X Influence Structural Stability and beta-Barrel Unfolding. PLoS One 2013
276 Papita Mandal Gajendra Kumar Azad Raghuvir Singh Tomar Identification of a novel histone H3 specific protease activity in nuclei of chicken liver Biophysical and Biochemical Research Communication 2012
277 Gajendra Kumar Azad Shah Jaimin Balkrishna Narayanan Sathish Sangit Kumar Raghuvir Singh Tomar Multifunctional Ebselen drug functions through the activation of DNA damage response and alterations in nuclear proteins Biochemical Pharmacology 2012
278 Vineet K. Sharma Naveen Kumar Tulika Prakash Todd D. Taylor Fast and Accurate Taxonomic Assignments of Metagenomic Sequences Using MetaBin PLoS One 2012
279 Pritam Khan AR Barik EM Vinod KS Sangunni Himanshu Jain KV Adarsh Coexistence of fast photodarkening and slow photobleaching in Ge 19 As 21 Se 60 thin films Optics Express 2012
280 Deepti Chaturvedi Radhakrishnan Mahalakshmi Ankit Gupta Modified CNBr cleavage protocol for efficient separation of Met-Ser containing OmpX-Om14 membrane protein fusion Intl. Rev. Biophys. Chem. 2012
281 Maria Giovanna Rossetto Erica Zanarella Genny Orso Michele Scorzeto Aram Megighian Vimlesh Kumar Antonio V Delgado-Escueta Andrea Daga Defhc1.1, a homologue of the juvenile myoclonic gene EFHC1, modulates architecture and basal activity of the neuromuscular junction in Drosophila Human Molecular Genetics 2011
282 Hidehiro Toh Vineet K. Sharma Kenshiro Oshima Shinji Kondo Masahira Hattori F. Bruce Ward Andrew Free Todd D. Taylor Complete Genome Sequences of Arcobacter butzleri ED-1 and Arcobacter sp. Strain L, Both Isolated from a Microbial Fuel Cell Journal of Bacteriology 2011
283 Tulika Prakash Kenshiro Oshima Hidetoshi Morita Shinji Fukuda Akemi Imaoka Naveen Kumar Vineet K. Sharma Seok-Won Kim Mahoko Takahashi Naruya Saitou Todd D. Taylor Hiroshi Ohno Yoshinori Umesaki Masahira Hattori Complete Genome Sequences of Rat and Mouse Segmented Filamentous Bacteria, a Potent Inducer of Th17 Cell Differentiation Cell Host and Microbe 2011
284 Kelly-Anne F Twist Elizabeth A Campbell Padraig Deighan Sergei Nechaev Vikas Jain E Peter Geiduschek Ann Hochschild Seth A Darst Crystal structure of the bacteriophage T4 late-transcription coactivator gp33 with the β-subunit flap domain of Escherichia coli RNA polymerase Proceedings of the National Academy of Sciences 2011
285 Taro Kawai Himanshu Kumar Shizuo Akira Pathogen Recognition by the Innate Immune System International Reviews of Immunology 2011